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Transposable element polymorphisms improve prediction of complex agronomic traits in rice
Vourlaki, IT; Castanera, R; Ramos-Onsins, SE; Casacuberta, JM; Pérez-Enciso, M
10.1007/s00122-022-04180-2
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Topologically associating domains and the evolution of three-dimensional genome architecture in rice
Kurbidaeva, A; Gupta, S; Zaidem, M; Castanera, R; Sato, Y; Joly-Lopez, Z; Casacuberta, JM; Purugganan, MD
20.500.12327/4614
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Tandem LTR-retrotransposon structures are common and highly polymorphic in plant genomes
Morales-Diaz, N; Sushko, S; Campos-Dominguez, L; Kopalli, V; Golicz, AA; Castanera, R; Casacuberta, JM
20.500.12327/4589
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Deciphering the Genetic Basis of Allelopathy in japonica Rice Cultivated in Temperate Regions Using a Genome-Wide Association Study
García-Romeral, J; Castanera, R; Casacuberta, J; Domingo, C
38530496
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Evaluation of deep learning for predicting rice traits using structural and single-nucleotide genomic variants
Vourlaki, IT; Ramos-Onsins, SE; Pérez-Enciso, M; Castanera, R
20.500.12327/3282
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Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems
Auer, L; Buée, M; Fauchery, L; Lombard, V; Barry, KW; Clum, A; Copeland, A; Daum, C; Foster, B; LaButti, K; Singan, V; Yoshinaga, Y; Martineau, C;...
38148573
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Transposons are important contributors to gene expression variability under selection in rice populations
Castanera, R; Morales-Díaz, N; Gupta, S; Purugganan, M; Casacuberta, JM
37467142
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Absence of major epigenetic and transcriptomic changes accompanying an interspecific cross between peach and almond
de Tomás, C; Bardil, A; Castanera, R; Casacuberta, JM; Vicient, CM
35928404
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Improved High-Quality Genome Assembly and Annotation of Pineapple (Ananas comosus) Cultivar MD2 Revealed Extensive Haplotype Diversity and Diversified FRS/FRF Gene Family
Yow, AG; Bostan, H; Castanera, R; Ruggieri, V; Mengist, MF; Curaba, J; Young, R; Gillitt, N; Iorizzo, M
35052394
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Amplification dynamics of miniature inverted-repeat transposable elements and their impact on rice trait variability
Castanera, Raul; Vendrell-Mir, Pol; Bardil, Amelie; Carpentier, Marie-Christine; Panaud, Olivier; Casacuberta, Josep M
33866641
